Information for 10-GAGACCGGCTCAG (Motif 17)

A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C T G A G T C A G T C A C T G A C T G A C G T A G T C A C G T A T G C
p-value:1e-8
log p-value:-1.897e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.5 +/- 26.5bp
Average Position of motif in Background57.8 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GAGACCGGCTCAG
-----NGGATTAN
 A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGACCGGCTCAG----------
---YCAGGCWCAGTACCAGGCTC
 A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGACCGGCTCAG
CCAGACAG------
 A C G T A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGACCGGCTCAG
CCAGACRSVB----
 A C G T A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGACCGGCTCAG
-AAACCGGTTT--
 A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGACCGGCTCAG---
CGCGCCGGGTCACGTA
 A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GAGACCGGCTCAG
------NGCTN--
 A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:GAGACCGGCTCAG
-------GCTCCG
 A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GAGACCGGCTCAG-
AGCAACAGCCGCACC
 A C G T A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GAGACCGGCTCAG
---CCAGGAACAG
 A T C G C G T A A C T G C G T A A G T C T A G C A C T G A C T G A G T C A C G T A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G