Information for 7-TTKRCARSGCCTA (Motif 10)

A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A
Reverse Opposite:
A G C T C G T A A C T G A C T G A G T C A T C G A G T C C G A T A C T G A G T C G T A C G T C A C G T A
p-value:1e-10
log p-value:-2.371e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.7 +/- 23.7bp
Average Position of motif in Background69.7 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTKRCARSGCCTA
----CNAGGCCT-
 A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TTKRCARSGCCTA-
------AGGCCTAG
 A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTKRCARSGCCTA
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTKRCARSGCCTA
NNTTGGCANN-----
 A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTKRCARSGCCTA
TTGACAGC-----
 A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTKRCARSGCCTA
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTKRCARSGCCTA
CTTGGCAA------
 A C G T A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTKRCARSGCCTA
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTKRCARSGCCTA
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTKRCARSGCCTA--
NNGGCCACGCCTTTN
 A C G T A C G T A C T G C T A G A G T C C G T A C T A G A T G C A C T G A G T C A G T C A C G T C T G A A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G