Information for 5-TCACGTGGGGCCGCGW (Motif 21)

A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
Reverse Opposite:
C G A T A G T C A C T G A G T C A C T G A C T G A G T C A G T C A G T C A G T C C G T A A G T C A C T G A C G T A C T G C G T A
p-value:1e-7
log p-value:-1.622e+01
Information Content per bp:1.900
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 36.2bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCACGTGGGGCCGCGW
GTCACGTGGM-------
 A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCACGTGGGGCCGCGW
-CACGTGGN-------
 A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCACGTGGGGCCGCGW
-CACGTGGC-------
 A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCACGTGGGGCCGCGW
GGTCACGTGA--------
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCACGTGGGGCCGCGW
GGTCACGTGC--------
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCACGTGGGGCCGCGW
GGTCACGTGG--------
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGGGGCCGCGW
GTCACGTGGT-------
 A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCACGTGGGGCCGCGW
TCACGTGC--------
 A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCACGTGGGGCCGCGW
GTCACGTGNT-------
 A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCACGTGGGGCCGCGW
GHCACGTG---------
 A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A C T G C T A G A C T G A G T C T A G C A C T G A G T C C T A G C G A T
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T