Information for 11-GCATTTGTTA (Motif 17)

A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A
Reverse Opposite:
G A C T C G T A C G T A A T G C C G T A C G T A T G C A C G A T A C T G A G T C
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.847
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif59.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets37.7 +/- 22.7bp
Average Position of motif in Background49.8 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GCATTTGTTA-----
NCNTTTGTTATTTNN
 A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCATTTGTTA-
-CCATTGTTNY
 A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A A C G T
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCATTTGTTA
---ATTGTT-
 A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A
A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCATTTGTTA
-CCTTTGTT-
 A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCATTTGTTA
-CCWTTGTY-
 A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GCATTTGTTA--
---ATTGTTTAN
 A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCATTTGTTA----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCATTTGTTA----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCATTTGTTA-
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCATTTGTTA-
-CCTTTGTTTT
 A C T G G T A C G C T A A C G T A C G T A C G T A T C G A C G T C G A T C G T A A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T