Information for 8-RGGCTCCATA (Motif 16)

T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A
Reverse Opposite:
A C G T C G T A A G C T A C T G A T C G C G T A T A C G A G T C A G T C A G C T
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.776
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif31.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets59.6 +/- 25.9bp
Average Position of motif in Background43.7 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RGGCTCCATA---
-GGCTCYAKCAYC
 T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A A C G T A C G T A C G T
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RGGCTCCATA
-NGCTN----
 T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--RGGCTCCATA
TTTGGCGCCAAA
 A C G T A C G T T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RGGCTCCATA
--GCTCCG--
 T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RGGCTCCATA-
-DGATCRATAN
 T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A A C G T
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:RGGCTCCATA---
---ATGMATATDC
 T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--RGGCTCCATA
GTGGGCCCCA--
 A C G T A C G T T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----RGGCTCCATA--
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----RGGCTCCATA--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----RGGCTCCATA---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T T C G A A C T G A C T G A T G C C G A T A T G C G T A C C T G A A C G T T G C A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G