Information for 12-ACAGAGASAGAGGGAG (Motif 24)

C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G
Reverse Opposite:
T A G C G C A T A T G C G A T C A G T C A G C T A T G C A C G T A T C G A G C T A T G C G A C T A T G C A C G T A T C G C G A T
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.685
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif109.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets52.0 +/- 23.7bp
Average Position of motif in Background48.9 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ACAGAGASAGAGGGAG-----
-SMCAGTCWGAKGGAGGAGGC
 C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:2
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ACAGAGASAGAGGGAG
---GTGGGGGAGGGG-
 C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G
A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ACAGAGASAGAGGGAG
AAACAGACAAAGGAAT
 C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--ACAGAGASAGAGGGAG
AGAAAGTGAAAGTGA---
 A C G T A C G T C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:ACAGAGASAGAGGGAG
---AAAACAAAGG---
 C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ACAGAGASAGAGGGAG
-GTAGGGCAAAGGTCA
 C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G
A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:ACAGAGASAGAGGGAG
-----AACAGATGGT-
 C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:ACAGAGASAGAGGGAG
-----AACAGATGGC-
 C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.49
Offset:8
Orientation:forward strand
Alignment:ACAGAGASAGAGGGAG--
--------AGAGGAAGTG
 C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAGASAGAGGGAG
GAAAGTGAAAGT-----
 A C G T C G T A T A G C T C G A T A C G C T G A A T C G T C G A A T C G G T C A T A C G T C G A C T A G C T A G T A C G C G T A A T C G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T