Information for 14-CCTGGGCTTTCCC (Motif 18)

A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G C T A G C G T A C G T A C G T A A C T G A G T C A G T C A G T C C G T A C T A G A C T G
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 30.7bp
Average Position of motif in Background53.9 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CCTGGGCTTTCCC
--GGGGATTTCC-
 A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CCTGGGCTTTCCC
---GGGGATTTCC
 A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCTGGGCTTTCCC
-NGGGGATTTCCC
 A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCTGGGCTTTCCC--
---GGGGATTCCCCC
 A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCTGGGCTTTCCC
--GGGAATTTCC-
 A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCTGGGCTTTCCC
WDNCTGGGCA-----
 A C G T A C G T A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCTGGGCTTTCCC--
--AGGGGATTCCCCT
 A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCTGGGCTTTCCC
---GGGAATTTCC
 A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTGGGCTTTCCC--
--AGGGGATTCCCCT
 A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CCTGGGCTTTCCC---
------HTTTCCCASG
 A G T C A G T C C G A T A C T G A C T G A C T G A G T C C G A T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G