Information for 4-CAGGGAGGCCCCT (Motif 3)

G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T
Reverse Opposite:
C G T A A T C G A T C G A C T G A C T G A G T C G T A C C G A T A T G C G A T C A G T C A G C T A C T G
p-value:1e-14
log p-value:-3.261e+01
Information Content per bp:1.799
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif44.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.5 +/- 26.4bp
Average Position of motif in Background50.0 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAGGGAGGCCCCT
AGGGGATTCCCCT
 G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAGGGAGGCCCCT
AGGGGATTCCCCT
 G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAGGGAGGCCCCT-----
----CAGGCCNNGGCCNN
 G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGGGAGGCCCCT
GGGGGAATCCCC-
 G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAGGGAGGCCCCT
--GGAAATCCCC-
 G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAGGGAGGCCCCT
---CTAGGCCT--
 G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGGGAGGCCCCT
-GGGAAATCCCCN
 G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGGGAGGCCCCT--
-----AAGACCCYYN
 G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAGGGAGGCCCCT
-----AGGCCTNG
 G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGGAGGCCCCT--
TTGGGGGCGCCCCTAG
 A C G T G T A C C T G A A C T G C T A G A T C G C G T A A C T G A C T G A G T C A G T C A T G C A T G C G C A T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G