Information for 3-TVCAACCACTTTG (Motif 6)

C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C T G A C T G A A C T G C G A T C T A G C T A G A C G T A C G T A C T G A G C T G T C A
p-value:1e-14
log p-value:-3.233e+01
Information Content per bp:1.810
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.7 +/- 16.5bp
Average Position of motif in Background59.3 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TVCAACCACTTTG
---MRSCACTYAA
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TVCAACCACTTTG
-CAAATCACTG--
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TVCAACCACTTTG
---AAGCACTTAA
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TVCAACCACTTTG
---AASCACTCAA
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TVCAACCACTTTG
----ACCACTTAA
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G
A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TVCAACCACTTTG
-GCGACCACACTG
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TVCAACCACTTTG
----ACCACTTAA
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G
A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TVCAACCACTTTG-
--------CTTTGT
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TVCAACCACTTTG
-AAAACCGGTTTT
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G
A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

Sox1/MA0870.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TVCAACCACTTTG--
AACAATAACATTGTT
 C A G T T C G A G T A C C G T A C G T A A G T C A G T C C G T A A G T C A G C T A G C T A C G T A C T G A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T