Information for 12-GGCTAAAAAT (Motif 19)

A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.518e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 22.7bp
Average Position of motif in Background58.1 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GGCTAAAAAT---
-GCTAAAAATAGC
 A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GGCTAAAAAT---
-TCTAAAAATAGA
 A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GGCTAAAAAT---
-GCTATAAATAGC
 A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GGCTAAAAAT---
-ACTATAAATAGA
 A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GGCTAAAAAT----
ATGCTAAAAATAGAA
 A C G T A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGCTAAAAAT---
-DCYAAAAATAGM
 A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGCTAAAAAT--
--CCAAAAATAG
 A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGCTAAAAAT---
-KCCAAAAATAGC
 A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCTAAAAAT--
GGCCATAAATCA
 A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGCTAAAAAT---
GGCCATAAATCAC
 A C T G A C T G A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C