Information for 7-CTGTTTCAAAACACAG (Motif 12)

A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G
Reverse Opposite:
G T A C A G C T C A T G A C G T A T C G A C G T A C G T A C G T C A G T T A C G T G C A C T G A C G T A A G T C C T G A T A C G
p-value:1e-10
log p-value:-2.307e+01
Information Content per bp:1.683
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif62.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets46.2 +/- 24.9bp
Average Position of motif in Background44.4 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGTTTCAAAACACAG
--ATTGCACAATA---
 A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G
A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGTTTCAAAACACAG
CGGTTTCAAA------
 A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTGTTTCAAAACACAG-
-------AAACCACAGC
 A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTGTTTCAAAACACAG
------NAAACCACAG
 A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGTTTCAAAACACAG
--VTTRCATAAY----
 A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G
A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGTTTCAAAACACAG--
-AACACCAAAACAAAGGA
 A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTGTTTCAAAACACAG---
--GTTAAAAAAAAAAATTA
 A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTGTTTCAAAACACAG-
-------AAACCACANN
 A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGTTTCAAAACACAG
AATATTAATAAAGA---
 A C G T A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTGTTTCAAAACACAG--
-------AAATCACAGCA
 A G T C A G C T T A C G A C G T A G C T A C G T A T G C G C T A G T C A C G T A G T C A T A G C T C G A G A T C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A