Information for 8-TGGCCAGACT (Motif 16)

C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T
Reverse Opposite:
C G T A A T C G C G A T A G T C C G A T A C T G T C A G A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.914e+01
Information Content per bp:1.836
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif176.5
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets51.2 +/- 32.2bp
Average Position of motif in Background47.7 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TGGCCAGACT-
---BCAGACWA
 C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TGGCCAGACT-
---CCAGACAG
 C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGCCAGACT
TGCCCAGNHW
 C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGGCCAGACT---
---CCAGACRSVB
 C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGGCCAGACT-----
CAAATCCAGACATCACA
 A C G T A C G T C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGGCCAGACT
TGTCTAGACG
 C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGCCAGACT
ATGCCAGACN
 C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCAGACT-
GTGGCGTGACNG
 A C G T C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGGCCAGACT
AGGTGHCAGACA
 A C G T A C G T C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGCCAGACT
TTGGCA-----
 A C G T C G A T A C T G T C A G A G T C T G A C C G T A A C T G G C T A A T G C A C G T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T