Information for 6-GAGGCGTTTG (Motif 12)

A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C G T C A G T C A G T C A A T G C C A T G A G T C A G T C A C G T A T G C
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.861
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif93.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets45.1 +/- 24.1bp
Average Position of motif in Background46.9 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCGTTTG
CNAGGCCT---
 A C G T A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGGCGTTTG
--GGCVGTTR
 A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGGCGTTTG---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAGGCGTTTG---
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGGCGTTTG------
-TGGACTTTGNNCTCN
 A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCGTTTG
CTAGGCCT---
 A C G T A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGGCGTTTG----
CAGGCCNNGGCCNN
 A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGGCGTTTG-------
-TGGACTTTGNNCTNTG
 A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGGCGTTTG-
-TGGCAGTTGG
 A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G A C G T
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGGCGTTTG
-AGGTGTGA-
 A T C G C G T A A C T G A C T G G T A C T A C G A C G T A C G T A C G T A C T G
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T