p-value: | 1e-10 |
log p-value: | -2.350e+01 |
Information Content per bp: | 1.802 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.07% |
Number of Background Sequences with motif | 18.4 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 56.6 +/- 24.0bp |
Average Position of motif in Background | 34.3 +/- 11.7bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCAGAGTGCACTC -CAAAGGTCAG-- |
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HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GCAGAGTGCACTC CANAGNNCAAAGTCCA--- |
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HNF4G/MA0484.1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCAGAGTGCACTC AGAGTCCAAAGTCCA--- |
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RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GCAGAGTGCACTC TAGGGCAAAGGTCA--- |
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Pparg::Rxra/MA0065.2/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCAGAGTGCACTC GTAGGGCAAAGGTCA--- |
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PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCAGAGTGCACTC TGGGGCAAAGGTCA--- |
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PB0134.1_Hnf4a_2/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCAGAGTGCACTC- GGCAAAAGTCCAATAA |
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MTF1/MA0863.1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCAGAGTGCACTC TTTGCACACGGCAC-- |
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PB0099.1_Zfp691_1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAGAGTGCACTC---- NNNNTGAGCACTGTNNG |
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BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCAGAGTGCACTC--- GCCASCAGGGGGCGCYVNNG |
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