Information for 5-RTGASTCATC (Motif 4)

C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C
Reverse Opposite:
C T A G C T G A A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G T C
p-value:1e-20
log p-value:-4.764e+01
Information Content per bp:1.845
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.29%
Number of Background Sequences with motif249.4
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets47.4 +/- 26.1bp
Average Position of motif in Background52.9 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0142.1_Jundm2_2/Jaspar

Match Rank:1
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---RTGASTCATC---
NNGGTGACTCATCANN
 A C G T A C G T A C G T C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C A C G T A C G T A C G T
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T

JUND/MA0491.1/Jaspar

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCATC
GGTGACTCATC
 A C G T C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:RTGASTCATC
ATGASTCATY
 C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C
T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

FOSL2/MA0478.1/Jaspar

Match Rank:4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:RTGASTCATC-
NTGAGTCATCN
 C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C A C G T
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--RTGASTCATC
NNATGAGTCATN
 A C G T A C G T C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:6
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-RTGASTCATC-
GATGAGTCATCC
 A C G T C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C A C G T
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:7
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCATC-
DATGASTCATHN
 A C G T C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C A C G T
C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RTGASTCATC-
ATGAGTCATCN
 C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C A C G T
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RTGASTCATC
ATGACTCATC
 C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C
T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-RTGASTCATC
TGTGACTCATT
 A C G T C T A G A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T A G T C
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T