Information for 9-RAATAANCAGATTGTT (Motif 8)

C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
Reverse Opposite:
C T G A G T C A A T G C C G T A C T G A C G A T G A T C A C G T A T C G A T C G A C G T C G A T G C T A C G A T A C G T G A T C
p-value:1e-12
log p-value:-2.826e+01
Information Content per bp:1.717
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.5 +/- 24.4bp
Average Position of motif in Background64.4 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox11/MA0869.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:RAATAANCAGATTGTT
-AACACTGAAATTGTT
 C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
A C G T T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RAATAANCAGATTGTT
-AATAAACAATN----
 C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RAATAANCAGATTGTT
AAATAAACA-------
 C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RAATAANCAGATTGTT
AAACAAACATTC----
 C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RAATAANCAGATTGTT
-AACAATGNTATTGTT
 C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
A C G T T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.58
Offset:10
Orientation:forward strand
Alignment:RAATAANCAGATTGTT
----------ATTGTT
 C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

PB0042.1_Mafk_1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RAATAANCAGATTGTT
AAGTCAGCANTTTTN-
 C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RAATAANCAGATTGTT
---TAATCHGATTAC-
 C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
A C G T A C G T A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RAATAANCAGATTGTT
AAAGTAAACAAAAATT-
 A C G T C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RAATAANCAGATTGTT
--NTAATBNAATTA--
 C T A G C G T A C G T A C A G T C G T A C G T A A T G C A T G C C G T A C T A G C G T A A G C T A C G T T A C G A C G T A G C T
A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T