Information for 6-WWCCTKTGGWTAARKA (Motif 5)

C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A
Reverse Opposite:
A C G T G T C A A G C T A C G T C G A T C G T A C G T A A G T C A G T C C G T A G T C A C G T A A C T G A C T G C G T A C G T A
p-value:1e-13
log p-value:-3.143e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.2 +/- 13.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:WWCCTKTGGWTAARKA
--GCTGTGGTTT----
 C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:WWCCTKTGGWTAARKA
---CTGTGGTTTN---
 C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WWCCTKTGGWTAARKA
-GTCTGTGGTTT----
 C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:WWCCTKTGGWTAARKA
--NNTGTGGTTT----
 C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:WWCCTKTGGWTAARKA
-NNHTGTGGTTWN---
 C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:WWCCTKTGGWTAARKA---
--NNNTTAGTTAACTNANN
 C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A A C G T A C G T A C G T
A C G T A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:WWCCTKTGGWTAARKA---
--NTTTTAGTTAACNNAGN
 C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A A C G T A C G T A C G T
A C G T A C G T T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:WWCCTKTGGWTAARKA-----
----AGCTGTTAACTAGCCGT
 C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-WWCCTKTGGWTAARKA
ANTCCTTTGTCTNNNN-
 A C G T C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--WWCCTKTGGWTAARKA
ACTTCCTGTT--------
 A C G T A C G T C G A T C G A T A G T C A G T C A C G T A C G T A C G T A C T G C T A G C G A T A C G T C G T A C G T A C T G A C A G T C G T A
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T