Information for 22-AAATACATTTAGCATC (Motif 35)

C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
Reverse Opposite:
C A T G G C T A C G A T A C T G T G A C A G C T C G T A G T C A C G T A C G A T C A T G A G C T C T G A C A G T C G A T A C G T
p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.677
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets56.1 +/- 30.9bp
Average Position of motif in Background55.8 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAATACATTTAGCATC
NTAATBNAATTA------
 A C G T A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAATACATTTAGCATC
TAATTAAATTA------
 A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAATACATTTAGCATC
TAATTAAATTA------
 A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAATACATTTAGCATC
TAATTAAATTA------
 A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAATACATTTAGCATC
TAATYNRATTAR-----
 A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAATACATTTAGCATC
TNGAATTTCATTNAN----
 A C G T A C G T A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAATACATTTAGCATC
NNTATTACATGTANNNT-
 A C G T A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAATACATTTAGCATC
AAAATACATGTAAAAAT
 A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAATACATTTAGCATC
GCTAATTATAATTATC---
 A C G T A C G T A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAATACATTTAGCATC
TAAATACATGTAAAATT
 A C G T C G T A C G T A G C T A G A C T C T G A G A T C C G T A C G A T A C G T C G A T T C G A A C T G G T A C C G T A C G A T G A T C
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T