Information for 9-GAAACAGCTTYTT (Motif 18)

C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
Reverse Opposite:
G C T A C T G A C T A G G T C A C T G A C T A G A G T C A C G T T C A G A C G T A C G T A C G T G A T C
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.730
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif112.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets41.8 +/- 27.1bp
Average Position of motif in Background53.2 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSC/MA0665.1/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GAAACAGCTTYTT
--AACAGCTGTT-
 C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
A C G T A C G T C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GAAACAGCTTYTT-
GCAACAGCTGTTGT
 C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

MYF6/MA0667.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GAAACAGCTTYTT
--AACAGCTGTT-
 C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
A C G T A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GAAACAGCTTYTT
--AACAGCTGAT-
 C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
A C G T A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GAAACAGCTTYTT
--AGCAGCTGCT-
 C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GAAACAGCTTYTT
--AACAGCTG---
 C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAAACAGCTTYTT
-BAACAGCTGT--
 C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GAAACAGCTTYTT
NNAGCAGCTGCT-
 C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAAACAGCTTYTT
NGNGACAGCTGCN-
 A C G T C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAAACAGCTTYTT
--AACAGCTGCAG
 C T A G T G C A C G T A C G T A A G T C C G T A A C T G G A T C A G C T A C G T A G T C A G C T C G A T
A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G