Information for 15-TGGGCCTCTGACCACA (Motif 14)

A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A
Reverse Opposite:
A G C T A C T G C A G T A C T G A T C G A C G T A T G C C G T A A C T G C T G A C A T G A T C G T A G C A G T C G T A C C T G A
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.729
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.2 +/- 21.4bp
Average Position of motif in Background60.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGGGCCTCTGACCACA
-TGACCTCTGACCCCN
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGGGCCTCTGACCACA
-TGACCTTTGACCTC-
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:7
Orientation:forward strand
Alignment:TGGGCCTCTGACCACA---
-------NWAACCACADNN
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TGGGCCTCTGACCACA-
-------NAAACCACAG
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGGCCTCTGACCACA
-TGACCTTTGCCCTA-
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TGGGCCTCTGACCACA--
--------AAACCACAGC
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGGGCCTCTGACCACA
----GCTCCGCCCMCY
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TGGGCCTCTGACCACA---
--------AAACCACAGAN
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGGGCCTCTGACCACA
-------CTGCCCGCA
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGGCCTCTGACCACA
-TGACCTTTGCCCCA-
 A G C T A C T G C T A G A C T G A T G C G T A C G A C T A G T C G C A T T A C G G T C A A T G C A G T C G C T A G T A C C T G A
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T