Information for 5-CCGCTGACAAGCA (Motif 8)

A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
Reverse Opposite:
A C G T A T C G A T G C A G C T A C G T A C T G A G C T A G T C C T G A A T C G A G T C C T A G A T C G
p-value:1e-11
log p-value:-2.714e+01
Information Content per bp:1.784
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets64.8 +/- 18.8bp
Average Position of motif in Background34.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCGCTGACAAGCA
--RHTGWCAR---
A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCGCTGACAAGCA
-VGCTGWCAVB--
A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCGCTGACAAGCA
GGTGYTGACAGS--
A C G T A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCGCTGACAAGCA
---TTGACAG---
A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGACAAGCA
CGCCCCCTGACA----
A C G T A C G T A C G T A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCGCTGACAAGCA
-ARNTGACA----
A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCGCTGACAAGCA
---TTGACAGG--
A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCGCTGACAAGCA
---TTGACAGC--
A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCGCTGACAAGCA
---TTGCCAAG--
A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCGCTGACAAGCA-
--NCTGTCAATCAN
A T G C A G T C A C T G A T G C A G C T A C T G T C G A G T A C C G T A C T G A A T C G A T G C T C G A A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A