Information for 4-CTCCGGGGCTGCGGTT (Motif 16)

A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T
Reverse Opposite:
T C G A C T G A A G T C A G T C A C T G A G T C C G T A A C T G A G T C A G T C A T G C A T G C A T C G A C T G C T G A A C T G
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 22.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:CTCCGGGGCTGCGGTT-
--------TTGCGGTTT
 A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CTCCGGGGCTGCGGTT-
-------GCTGTGGTTT
 A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTCCGGGGCTGCGGTT-
------GTCTGTGGTTT
 A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:CTCCGGGGCTGCGGTT--
--------CTGTGGTTTN
 A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTCCGGGGCTGCGGTT-
-------TTTGCGGTTT
 A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CTCCGGGGCTGCGGTT-
-------NNTGTGGTTT
 A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTCCGGGGCTGCGGTT
---CGCAGCTGCG---
 A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTCCGGGGCTGCGGTT
------NGCTN-----
 A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTCCGGGGCTGCGGTT--
------NNHTGTGGTTWN
 A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTCCGGGGCTGCGGTT
TGCCCCCGGGCA------
 A C G T A C G T A G T C A G C T A G T C A T G C A T C G A T C G A C T G A C T G A G T C A C G T A C T G G T A C A C T G A C T G A G C T A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T