Information for 3-CNACAGCTGB (Motif 3)

T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T
Reverse Opposite:
T G C A A G T C C G T A T C A G A T G C A C G T A C T G A G C T T A G C A T C G
p-value:1e-35
log p-value:-8.288e+01
Information Content per bp:1.697
Number of Target Sequences with motif229.0
Percentage of Target Sequences with motif27.79%
Number of Background Sequences with motif5373.4
Percentage of Background Sequences with motif11.59%
Average Position of motif in Targets50.0 +/- 26.9bp
Average Position of motif in Background50.5 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.97
Offset:2
Orientation:forward strand
Alignment:CNACAGCTGB--
--ACAGCTGTTN
 T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:CNACAGCTGB
NNACAGCTGC
 T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:CNACAGCTGB
NNVCAGCTGB
 T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.94
Offset:1
Orientation:forward strand
Alignment:CNACAGCTGB--
-AACAGCTGCAG
 T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.94
Offset:1
Orientation:forward strand
Alignment:CNACAGCTGB--
-GACAGCTGCAG
 T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:CNACAGCTGB
CAGCAGCTGN
 T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:CNACAGCTGB--
--ACAGCTGTTV
 T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.94
Offset:1
Orientation:forward strand
Alignment:CNACAGCTGB
-AACAGCTG-
 T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--CNACAGCTGB-
NGNGACAGCTGCN
 A C G T A C G T T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:CNACAGCTGB---
-NVCAGCTGBBNN
 T A G C A T C G T C G A A G T C C G T A A T C G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C