Information for 4-RATGAGAWAWTSCWRG (Motif 7)

T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G
Reverse Opposite:
A G T C G A T C C G T A A C T G A T C G C G T A C G A T A C G T C G A T A C G T A G T C A C G T A G T C C G T A C G A T A G T C
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.823
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 31.6bp
Average Position of motif in Background38.2 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RATGAGAWAWTSCWRG-
--TGACANARRCCAGRC
 T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G A C G T
A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--RATGAGAWAWTSCWRG
AAGATAAGATAACA----
 A C G T A C G T T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T A C G T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---RATGAGAWAWTSCWRG
AAAGATGATGTCATC----
 A C G T A C G T A C G T T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RATGAGAWAWTSCWRG--
---TAGAANVTTCTAGAA
 T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G A C G T A C G T
A C G T A C G T A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-RATGAGAWAWTSCWRG
GAAAGTGAAAGT-----
 A C G T T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RATGAGAWAWTSCWRG
GATGAGTCATN-----
 T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RATGAGAWAWTSCWRG-
--GAAAAAATTGCAAGG
 T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G A C G T
A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:RATGAGAWAWTSCWRG
------GCATTCCAGN
 T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

HSF4/MA0771.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:RATGAGAWAWTSCWRG--
-----GAANNTTCTAGAA
 T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RATGAGAWAWTSCWRG
AAGATGATGTCAT-----
 A C G T A C G T T C A G C G T A A C G T C T A G C G T A A C T G C G T A C G T A C G T A C G T A A C G T T A G C A G T C C G A T C T A G C T A G
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T