Information for 2-TTCTTTATGTGBT (Motif 2)

C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
Reverse Opposite:
G C T A T A G C G A T C G C T A A G T C C G T A A C G T T G C A C T G A C T G A C T A G C T G A G C T A
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.664
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif10.28%
Number of Background Sequences with motif1341.0
Percentage of Background Sequences with motif2.78%
Average Position of motif in Targets60.0 +/- 24.8bp
Average Position of motif in Background48.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0005.1_Forkhead_class/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTCTTTATGTGBT
-TGTTTATTT---
 C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTCTTTATGTGBT
--TTTTATKRGG-
 C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCTTTATGTGBT
NTGTTTAYATWW-
 C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCTTTATGTGBT
TTGTTTAC-----
 C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTCTTTATGTGBT
-TGTTTAC-----
 C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTCTTTATGTGBT
-TTTTTATTGG--
 C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTCTTTATGTGBT----
NTNNTTAAGTGGTTANN
 C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTCTTTATGTGBT
TATTGTTTATT----
 A C G T A C G T C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTCTTTATGTGBT
-NTTTTATTGG--
 C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCTTTATGTGBT
TTGTTTAC-----
 C G A T A G C T A G T C A G C T G A C T A C G T G T C A C G A T C T A G C G A T C A T G A T C G C G A T
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T