Information for 3-CAGCTGGGTT (Motif 5)

A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
Reverse Opposite:
C T G A T G C A T G A C T A G C A G T C G T C A C T A G A G T C G A C T A C T G
p-value:1e-12
log p-value:-2.877e+01
Information Content per bp:1.770
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif612.8
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets44.9 +/- 23.5bp
Average Position of motif in Background48.6 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGGGTT
HCAGCTGDTN-
 A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGGGTT
NAACAGCTGG---
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGGGTT
GCAGCTGTNN-
 A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGGGTT
CAGCAGCTGN---
 A C G T A C G T A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGGGTT
NVCAGCTGBBNN
 A C G T A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGGGTT
VCAGCTGBNN-
 A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGGGTT
ACAGCTGTTN-
 A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGGTT
ANCAGCTG----
 A C G T A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGGGTT
CGCAGCTGCG--
 A C G T A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGGTT
AACAGCTG----
 A C G T A C G T A G T C C T G A A C T G A G T C A C G T A C T G A T C G A C T G A C G T A G C T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T