Information for 17-ACAGTGTCCG (Motif 27)

C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.039e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 22.7bp
Average Position of motif in Background45.0 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACAGTGTCCG---
-CAACGTCCGCGG
 C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACAGTGTCCG
CTCATTGTC--
 A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------ACAGTGTCCG
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACAGTGTCCG
-CTTTGT---
 C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTGTCCG
CACAGN-----
 A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACAGTGTCCG----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACAGTGTCCG--
--NRYTTCCGGY
 C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T
A C G T A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAGTGTCCG--
--NRYTTCCGGH
 C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACAGTGTCCG
CCATTGTTYB
 C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACAGTGTCCG-
AGGTCANTGACCTN
 A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C T G A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C