Information for 5-GGGMCRMTGCMYCTGC (Motif 12)

A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C C G T A A C T G T C A G C A G T A C T G A G T C C G T A A C T G A G C T A C T G C A T G A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.616e+01
Information Content per bp:1.864
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 10.3bp
Average Position of motif in Background19.3 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GGGMCRMTGCMYCTGC--
------SNGCACCTGCHS
 A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GGGMCRMTGCMYCTGC-
-------CGCACCTGCT
 A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GGGMCRMTGCMYCTGC-
-------TACACCTGTC
 A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GGGMCRMTGCMYCTGC-
-------AACACCTGCT
 A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGGMCRMTGCMYCTGC
NAGGTCANTGACCT---
 A C G T A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GGGMCRMTGCMYCTGC-
-------CGCAGCTGCG
 A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGGMCRMTGCMYCTGC---
-------NVCAGCTGBBNN
 A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGGMCRMTGCMYCTGC-----
----CTCAGCAGCTGCTACTG
 A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GGGMCRMTGCMYCTGC-
-------NNCACCTGNN
 A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGMCRMTGCMYCTGC
AATCGCACTGCATTCCG
 A C G T A C T G A C T G A C T G G T A C A G T C C T G A G T A C C G A T A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G T C
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G