Information for 15-GATTGACTAGCCA (Motif 16)

A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T C T G A A C T G A C G T A G T C C G T A G T C A A C G T A G T C
p-value:1e-11
log p-value:-2.568e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 20.5bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GATTGACTAGCCA
---CGTCTAGACA
 A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A
A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GATTGACTAGCCA
TGAGTGACAGSC--
 A C G T A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GATTGACTAGCCA
BTGABTGACAGS---
 A C G T A C G T A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GATTGACTAGCCA
NTGATTGACAGN---
 A C G T A C G T A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GATTGACTAGCCA
TTGATTGN-------
 A C G T A C G T A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GATTGACTAGCCA----
-----ACTAGCCAATCA
 A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:GATTGACTAGCCA-
------BCAGACWA
 A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GATTGACTAGCCA--
---GGACCACCCACG
 A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A A C G T A C G T
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------GATTGACTAGCCA
NNNNGTTGATTGGGTCG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GATTGACTAGCCA-
--------TGCCAA
 A C T G C G T A A C G T A C G T A C T G G T C A G T A C A G C T C G T A A C T G A G T C G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A