Information for 1-CCGAGGACACCCT (Motif 1)

A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G A G C T A C T G A C G T A G T C A G T C C A G T A G T C A C T G A C T G
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.4 +/- 22.1bp
Average Position of motif in Background38.1 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCGAGGACACCCT
NCGCGGACGTTG-
 A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCGAGGACACCCT
--GCTGTTACCCT
 A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T
A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGAGGACACCCT
CCAGGAACAG---
 A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCGAGGACACCCT
--GGCCACACCCA
 A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T
A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCGAGGACACCCT-
--GGCCACACCCAN
 A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCGAGGACACCCT---
ATAAATGACACCTATCA
 A C G T A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCGAGGACACCCT
-GGGGGAATCCCC
 A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCGAGGACACCCT---
TTGGGGGCGCCCCTAG
 A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Klf12/MA0742.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCGAGGACACCCT----
--GACCACGCCCTTATT
 A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCGAGGACACCCT----
-TATCGACCCCCCACAG
 A G T C A G T C A C T G G C T A A C T G A C T G C G T A G T A C C T G A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G