Information for 3-GAGGCCTGCAATC (Motif 3)

A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C
Reverse Opposite:
A C T G C T G A A C G T A G C T A T C G A T G C C G T A A C T G A C T G A G T C A G T C A C G T A G T C
p-value:1e-12
log p-value:-2.778e+01
Information Content per bp:1.942
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.6 +/- 13.7bp
Average Position of motif in Background36.4 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAGGCCTGCAATC
-AGGCCTNG----
 A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCTGCAATC
CTAGGCCT------
 A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GAGGCCTGCAATC
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAGGCCTGCAATC--
---AGATGCAATCCC
 A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:GAGGCCTGCAATC--
-------CCAATCAA
 A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GAGGCCTGCAATC
-AGGTCTCTAACC
 A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GAGGCCTGCAATC-
--GGCCATAAATCA
 A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C A C G T
A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GAGGCCTGCAATC
--GGTCTGGCAT-
 A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:forward strand
Alignment:GAGGCCTGCAATC-
----CCWGGAATGY
 A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.48
Offset:2
Orientation:forward strand
Alignment:GAGGCCTGCAATC-
--GGCCATAAATCA
 A C T G C G T A A C T G A C T G A G T C A G T C A C G T A T C G A T G C C T G A C G T A A G C T A G T C A C G T
A C G T A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A