Information for 3-CCGTCCGGGAAGG (Motif 14)

A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G C T A G T C G T A C A G T C C T A G A C T G C T G A A G T C A C T G A C T G
p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.886
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 17.0bp
Average Position of motif in Background63.1 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCGTCCGGGAAGG
-CTTCCNGGAA--
 A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G
A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCGTCCGGGAAGG--
GNNACCGAGAATNNN
 A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCGTCCGGGAAGG
-CTTCTGGGAAA-
 A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G
A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCGTCCGGGAAGG
NTTTCCNGGAAA-
 A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCGTCCGGGAAGG-
NCTTCCNGGAAGNN
 A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G A C G T
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGTCCGGGAAGG
CTGTCTGG-----
 A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CCGTCCGGGAAGG
-------NGAAGC
 A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCGTCCGGGAAGG--
-TTTCCAGGAAATGG
 A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G A C G T A C G T
A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCGTCCGGGAAGG---
----TGGGGAAGGGCM
 A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

HINFP/MA0131.2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCGTCCGGGAAGG
CAACGTCCGCGG---
 A C G T A C G T A G T C A G T C A C T G A G C T A G T C A G T C A C T G C A T G A C T G C T G A C G T A A C T G A C T G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T