Information for 2-GGMACAGAGCGCT (Motif 13)

A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T
Reverse Opposite:
G T C A A C T G A G T C T A C G A T G C A C G T A T G C A G C T A C T G G A C T A C T G A G T C G T A C
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.777
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif59.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets48.3 +/- 25.5bp
Average Position of motif in Background47.9 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGMACAGAGCGCT
TGGAACAGMA----
 A C G T A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGMACAGAGCGCT
CCAGGAACAG------
 A C G T A C G T A C G T A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGMACAGAGCGCT-
GGGCGATGACCAYTC
 A C G T A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGMACAGAGCGCT
--AACAGATGGC-
 A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGMACAGAGCGCT
----CGGAGC---
 A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GGMACAGAGCGCT----
--ATAAGGGCGCGCGAT
 A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GGMACAGAGCGCT----
--ATAAAGGCGCGCGAT
 A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GGMACAGAGCGCT---
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GGMACAGAGCGCT-
-----AAACCGCAA
 A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GGMACAGAGCGCT-----
-NNNNTGAGCACTGTNNG
 A C T G A C T G T G A C C T G A T G A C C T G A A T C G C G T A A T C G A T G C A C T G A G T C C A G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G