Information for 4-AAGGGCTGGCAGC (Motif 6)

C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G G T A C A G T C C G T A A C T G A T G C A G T C A G T C A G C T A C G T
p-value:1e-9
log p-value:-2.097e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.3 +/- 27.3bp
Average Position of motif in Background51.8 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AAGGGCTGGCAGC
---VGCTGWCAVB
 C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AAGGGCTGGCAGC
----CTTGGCAA-
 C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGGCTGGCAGC
-AGGCCTNG----
 C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAGGGCTGGCAGC
---GGTTGGCAT-
 C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAGGGCTGGCAGC---
----SCTGTCARCACC
 C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGGGCTGGCAGC--
AAGCACCTGTCAATAT
 A C G T C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGCTGGCAGC--
NGTAGGTTGGCATNNN
 A C G T C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGGGCTGGCAGC
--GGTCTGGCAT-
 C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGGGCTGGCAGC
-AGGCCTAG----
 C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAGGGCTGGCAGC
----GCTGTCAA-
 C G T A C T G A A C T G A C T G A T C G A G T C A C G T A C T G A C T G G T A C C G T A C T A G A G T C
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T