Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-17 | -4.052e+01 | 0.0000 | 37.0 | 4.70% | 314.6 | 0.74% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-9 | -2.138e+01 | 0.0000 | 36.0 | 4.57% | 574.2 | 1.35% | motif file (matrix) |
svg |
3 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-8 | -1.874e+01 | 0.0000 | 41.0 | 5.20% | 790.4 | 1.85% | motif file (matrix) |
svg |
4 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-8 | -1.867e+01 | 0.0000 | 20.0 | 2.54% | 215.7 | 0.51% | motif file (matrix) |
svg |
5 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.695e+01 | 0.0000 | 17.0 | 2.16% | 172.5 | 0.40% | motif file (matrix) |
svg |
6 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.546e+01 | 0.0000 | 22.0 | 2.79% | 314.3 | 0.74% | motif file (matrix) |
svg |
7 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-6 | -1.406e+01 | 0.0000 | 160.0 | 20.30% | 5966.5 | 13.99% | motif file (matrix) |
svg |
8 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.335e+01 | 0.0001 | 142.0 | 18.02% | 5208.0 | 12.21% | motif file (matrix) |
svg |
9 |
| PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer | 1e-5 | -1.241e+01 | 0.0002 | 15.0 | 1.90% | 190.6 | 0.45% | motif file (matrix) |
svg |
10 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.943e+00 | 0.0017 | 64.0 | 8.12% | 2059.0 | 4.83% | motif file (matrix) |
svg |
11 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-4 | -9.313e+00 | 0.0030 | 7.0 | 0.89% | 55.1 | 0.13% | motif file (matrix) |
svg |
12 |
| IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer | 1e-3 | -9.134e+00 | 0.0033 | 20.0 | 2.54% | 408.8 | 0.96% | motif file (matrix) |
svg |
13 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-3 | -9.108e+00 | 0.0033 | 52.0 | 6.60% | 1617.6 | 3.79% | motif file (matrix) |
svg |
14 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-3 | -8.458e+00 | 0.0055 | 16.0 | 2.03% | 301.8 | 0.71% | motif file (matrix) |
svg |
15 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -8.380e+00 | 0.0056 | 26.0 | 3.30% | 642.8 | 1.51% | motif file (matrix) |
svg |
16 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.209e+00 | 0.0062 | 62.0 | 7.87% | 2106.2 | 4.94% | motif file (matrix) |
svg |
17 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -7.864e+00 | 0.0082 | 28.0 | 3.55% | 739.2 | 1.73% | motif file (matrix) |
svg |
18 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-3 | -7.685e+00 | 0.0093 | 32.0 | 4.06% | 901.6 | 2.11% | motif file (matrix) |
svg |
19 |
| IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer | 1e-3 | -7.623e+00 | 0.0094 | 14.0 | 1.78% | 262.3 | 0.62% | motif file (matrix) |
svg |
20 |
| YY1(Zf)/Promoter/Homer | 1e-3 | -7.540e+00 | 0.0097 | 12.0 | 1.52% | 204.2 | 0.48% | motif file (matrix) |
svg |
21 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-3 | -7.511e+00 | 0.0097 | 24.0 | 3.05% | 607.1 | 1.42% | motif file (matrix) |
svg |
22 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.013e+00 | 0.0149 | 32.0 | 4.06% | 939.2 | 2.20% | motif file (matrix) |
svg |
23 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-2 | -6.572e+00 | 0.0221 | 11.0 | 1.40% | 199.0 | 0.47% | motif file (matrix) |
svg |
24 |
| IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer | 1e-2 | -6.416e+00 | 0.0248 | 10.0 | 1.27% | 172.7 | 0.41% | motif file (matrix) |
svg |
25 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.016e+00 | 0.0355 | 26.0 | 3.30% | 759.5 | 1.78% | motif file (matrix) |
svg |
26 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.784e+00 | 0.0430 | 62.0 | 7.87% | 2332.0 | 5.47% | motif file (matrix) |
svg |
27 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.764e+00 | 0.0430 | 94.0 | 11.93% | 3827.3 | 8.98% | motif file (matrix) |
svg |
28 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.753e+00 | 0.0430 | 4.0 | 0.51% | 32.2 | 0.08% | motif file (matrix) |
svg |
29 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.717e+00 | 0.0430 | 72.0 | 9.14% | 2799.1 | 6.56% | motif file (matrix) |
svg |
30 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.664e+00 | 0.0430 | 18.0 | 2.28% | 469.3 | 1.10% | motif file (matrix) |
svg |
31 |
| IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer | 1e-2 | -5.493e+00 | 0.0483 | 6.0 | 0.76% | 80.0 | 0.19% | motif file (matrix) |
svg |
32 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.363e+00 | 0.0533 | 38.0 | 4.82% | 1304.1 | 3.06% | motif file (matrix) |
svg |
33 |
| Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -5.278e+00 | 0.0563 | 8.0 | 1.02% | 140.2 | 0.33% | motif file (matrix) |
svg |
34 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.268e+00 | 0.0563 | 48.0 | 6.09% | 1753.8 | 4.11% | motif file (matrix) |
svg |
35 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.219e+00 | 0.0563 | 47.0 | 5.96% | 1713.2 | 4.02% | motif file (matrix) |
svg |
36 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -5.121e+00 | 0.0604 | 201.0 | 25.51% | 9249.2 | 21.69% | motif file (matrix) |
svg |
37 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -5.115e+00 | 0.0604 | 71.0 | 9.01% | 2826.2 | 6.63% | motif file (matrix) |
svg |
38 |
| NFY(CCAAT)/Promoter/Homer | 1e-2 | -5.097e+00 | 0.0604 | 37.0 | 4.70% | 1283.1 | 3.01% | motif file (matrix) |
svg |
39 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.061e+00 | 0.0604 | 61.0 | 7.74% | 2367.6 | 5.55% | motif file (matrix) |
svg |
40 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -5.059e+00 | 0.0604 | 169.0 | 21.45% | 7637.0 | 17.91% | motif file (matrix) |
svg |
41 |
| OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-2 | -4.990e+00 | 0.0604 | 5.0 | 0.63% | 63.2 | 0.15% | motif file (matrix) |
svg |
42 |
| IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer | 1e-2 | -4.802e+00 | 0.0712 | 5.0 | 0.63% | 66.0 | 0.15% | motif file (matrix) |
svg |
43 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.751e+00 | 0.0732 | 54.0 | 6.85% | 2080.4 | 4.88% | motif file (matrix) |
svg |
44 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -4.613e+00 | 0.0820 | 100.0 | 12.69% | 4289.2 | 10.06% | motif file (matrix) |
svg |