Information for 12-ATTCAGCCAA (Motif 25)

C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T
p-value:1e-5
log p-value:-1.279e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.5 +/- 15.3bp
Average Position of motif in Background62.6 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------ATTCAGCCAA-
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:ATTCAGCCAA
----TGCCAA
 C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATTCAGCCAA
--BCAGACWA
 C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATTCAGCCAA-
--CGTGCCAAG
 C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATTCAGCCAA---
-ACTAGCCAATCA
 C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATTCAGCCAA--
ACATTCATGACACG
 A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTCAGCCAA--
CTGAGTCAGCAATTT
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATTCAGCCAA---
NNCATTCATTCATNNN
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATTCAGCCAA----
----AGCCAATCGG
 C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATTCAGCCAA----
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T