Information for 18-CACGGTGACAAGG (Motif 18)

A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C A C G T A C G T A C T G A C G T A G T C G T C A A G T C A G T C A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.788e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.4 +/- 14.3bp
Average Position of motif in Background26.2 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACGGTGACAAGG
---RHTGWCAR--
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CACGGTGACAAGG
-------ACAAAG
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CACGGTGACAAGG
----TTGACAGG-
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CACGGTGACAAGG
--ARNTGACA---
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CACGGTGACAAGG
----TTGACAG--
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACGGTGACAAGG----
-NNAGGGACAAGGGCNC
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CACGGTGACAAGG-
----VRRACAAWGG
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CACGGTGACAAGG--
------GACAATGNN
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CACGGTGACAAGG
--AGGTGTTAAT-
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CACGGTGACAAGG
--VGCTGWCAVB-
 A G T C G T C A G T A C A C T G A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C T G
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T