Information for 2-CTGGCACCGTGCTGGC (Motif 15)

G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C
Reverse Opposite:
T C A G A T G C A G T C G T C A A C T G G T A C C G T A A T G C C T A G C T A G G A C T A T C G A G T C A G T C G T C A A C T G
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.3 +/- 21.8bp
Average Position of motif in Background35.8 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTGGCACCGTGCTGGC-
--GGCCYCCTGCTGDGH
 G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTGGCACCGTGCTGGC
----CCCCCTGCTGTG
 G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTGGCACCGTGCTGGC
NNNNTTGGCGCCGANNN---
 A C G T A C G T A C G T A C G T G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CTGGCACCGTGCTGGC-
-------CCTGCTGAGH
 G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTGGCACCGTGCTGGC--
-------CATGCGGGTAC
 G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGGCACCGTGCTGGC
CTTGGCANNNTGCCAA-
 A C G T G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CTGGCACCGTGCTGGC---
----TCNCCTGCTGNGNNN
 G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CTGGCACCGTGCTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTGGCACCGTGCTGGC
--GGGTACGTGC----
 G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGGCACCGTGCTGGC
TTGGCATGGTGCCA--
 G T A C C A G T A C T G C T A G A T G C C G T A A G T C A G T C A T C G A C G T A C T G A G T C A C G T A C T G A T C G A G T C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T