Information for 12-GGTGGTCCAGCCT (Motif 12)

A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A C G T A C T G A T C G C T G A G T A C A G T C C T G A A G T C A G T C
p-value:1e-10
log p-value:-2.400e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 21.9bp
Average Position of motif in Background49.4 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGTGGTCCAGCCT
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGTGGTCCAGCCT
CGTGGGTGGTCC-----
 A C G T A C G T A C G T A C G T A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GGTGGTCCAGCCT-
------BCAGACWA
 A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGGTCCAGCCT
NNANTGGTGGTCTTNNN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTCCAGCCT
NTCGGTGGTCGC----
 A C G T A C G T A C G T A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGTGGTCCAGCCT
GRTGMTRGAGCC-
 A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTGGTCCAGCCT
---GGTCCCGCCC
 A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

ZBTB7B/MA0694.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGTGGTCCAGCCT
TTCGGTGGTCGC----
 A C G T A C G T A C G T A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:GGTGGTCCAGCCT
-------CAGCC-
 A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGTCCAGCCT-
AGATGCTRCTRCCHT
 A C G T A C T G A C T G A G C T A C T G A C T G A G C T A T G C A G T C C G T A A C T G A G T C A G T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T