Information for 1-ATATGCATAC (Motif 1)

C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C
Reverse Opposite:
T C A G A G C T T C G A A C G T T C A G G T A C G T C A G A C T C T G A G C A T
p-value:1e-18
log p-value:-4.196e+01
Information Content per bp:1.684
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif690.5
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets51.5 +/- 25.7bp
Average Position of motif in Background49.9 +/- 44.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou2f3/MA0627.1/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----ATATGCATAC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:2
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----ATATGCATAC--
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----ATATGCATAC--
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:ATATGCATAC
ATTTGCATA-
 C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---ATATGCATAC
TTCATTTGCATAT
 A C G T A C G T A C G T C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ATATGCATAC
ATTTGCATA-
 C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----ATATGCATAC---
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--ATATGCATAC
GHATATKCAT--
 A C G T A C G T C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ATATGCATAC
ATTTGCATAT
 C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATATGCATAC
ATTTGCATAA
 C G T A G A C T C T G A A C G T A C T G A G T C G T C A A G C T T C G A A G T C
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A