Information for 12-GGAGAGCTCACTT (Motif 22)

A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T
Reverse Opposite:
G C T A C G T A A C T G A C G T A C T G C G T A A C T G A G T C A C G T A G T C A C G T A G T C A G T C
p-value:1e-3
log p-value:-8.728e+00
Information Content per bp:1.933
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.5 +/- 9.5bp
Average Position of motif in Background56.2 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGAGAGCTCACTT-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGAGAGCTCACTT
--AGRGGTCA---
 A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGAGAGCTCACTT
---AAGGTCAC--
 A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGCTCACTT-
TCTCAAAGGTCACCTG
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGAGCTCACTT
ANGNAAAGGTCA---
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGCTCACTT--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGAGAGCTCACTT
--TRAGGTCA---
 A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGAGAGCTCACTT-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGAGAGCTCACTT-
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGCTCACTT
NGATGACGTCAT--
 A C G T A C T G A C T G C G T A A C T G C G T A A C T G G T A C A C G T A G T C C G T A A G T C C G A T C G A T
C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T A C G T