Information for 10-GGAMTTDACA (Motif 20)

A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A
Reverse Opposite:
A C G T A C T G A C G T G T C A G C T A T G C A C A T G C A G T T G A C T G A C
p-value:1e-6
log p-value:-1.460e+01
Information Content per bp:1.585
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif9.03%
Number of Background Sequences with motif2369.7
Percentage of Background Sequences with motif4.97%
Average Position of motif in Targets48.9 +/- 26.7bp
Average Position of motif in Background49.3 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GGAMTTDACA-
----TTGACAG
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GGAMTTDACA--
----TTGACAGG
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GGAMTTDACA--
----TTGACAGC
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGAMTTDACA
--ARNTGACA
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GGAMTTDACA--
----YTGWCADY
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGAMTTDACA---
---KTTCACACCT
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGAMTTDACA-------
TCNCTTTACAGCGNNNT
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGAMTTDACA-------
-GTATTGACAGGTNNTT
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGAMTTDACA----
----TTMACACCTT
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGAMTTDACA----
---TTTCACACCTN
 A C T G A C T G G T C A G T A C A C G T C G A T C A G T G T C A T G A C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T