Information for 6-GCCAGTTGGA (Motif 17)

A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A
Reverse Opposite:
A C G T A G T C G A T C C G T A C G T A G T A C C G A T A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.830e+01
Information Content per bp:1.855
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif86.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets44.4 +/- 27.6bp
Average Position of motif in Background51.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGTTGGA--
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GCCAGTTGGA--
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GCCAGTTGGA
TGGCAGTTGG-
 A C G T A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGTTGGA
TGGCAGTTGN-
 A C G T A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCCAGTTGGA
AACAGATGGC
 A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGTTGGA
NNVCAGCTGB-
 A C G T A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCCAGTTGGA
VNAVCAGCTGGC
 A C G T A C G T A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCAGTTGGA
NNVVCAGCTGBN
 A C G T A C G T A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCAGTTGGA----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCAGTTGGA
GGCVGTTR--
 A C T G G T A C A G T C C G T A A C T G G C A T A C G T C T A G T C A G C G T A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T