Information for 6-GTGTCCYGGGGCACTG (Motif 10)

A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
Reverse Opposite:
A T G C C G T A A C T G A C G T C A T G A G T C A G T C A G T C G A T C C T G A A C T G A T C G C T G A A G T C C T G A A T G C
p-value:1e-11
log p-value:-2.622e+01
Information Content per bp:1.702
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.7 +/- 27.7bp
Average Position of motif in Background46.7 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C/MA0524.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTGTCCYGGGGCACTG
-TGCCCCAGGGCA---
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTGTCCYGGGGCACTG
-TGCCCTNGGGCA---
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTGTCCYGGGGCACTG
-TGCCCNGGGGCA---
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGTCCYGGGGCACTG
TTGCCCTAGGGCAT--
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTGTCCYGGGGCACTG--
--NNNNTTGGGCACNNCN
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G A C G T A C G T
A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGTCCYGGGGCACTG
NTGCCCANNGGTNA--
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGTCCYGGGGCACTG
CCGCCCAAGGGCAG--
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTGTCCYGGGGCACTG
GTTGCCATGGCAAC--
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGTCCYGGGGCACTG
CTGTTCCTGG------
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGTCCYGGGGCACTG
ATGCCCTGAGGC----
 A T C G G A C T C T A G G A C T A T G C A G T C G A C T C T A G A C T G C T A G T A C G G A T C C G T A G T A C G C A T T A C G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T