Information for 3-CGTAGCGCTC (Motif 8)

T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C
Reverse Opposite:
C T A G T C G A T C A G A T G C T A C G A T G C G C A T C T G A T A G C A C T G
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.659
Number of Target Sequences with motif142.0
Percentage of Target Sequences with motif14.68%
Number of Background Sequences with motif3826.4
Percentage of Background Sequences with motif8.16%
Average Position of motif in Targets48.7 +/- 26.7bp
Average Position of motif in Background50.3 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTAGCGCTC-----
CGAACAGTGCTCACTAT
 A C G T A C G T T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

POL001.1_MTE/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CGTAGCGCTC----
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T A C G T T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C A C G T A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CGTAGCGCTC
-----NGCTN
 T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CGTAGCGCTC--
------GCTCCG
 T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGTAGCGCTC------
-NTCGCGCGCCTTNNN
 T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGTAGCGCTC----
NNNGGGGCGCCCCCNN
 A C G T A C G T T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CGTAGCGCTC--
--AASCACTCAA
 T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGTAGCGCTC------
-ANCGCGCGCCCTTNN
 T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGTAGCGCTC---
--AGCCACTCAAG
 T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C A C G T A C G T A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CGTAGCGCTC---
---NSCACTYVAV
 T G A C A T C G G A C T C G T A T A C G A T G C T A C G A G T C A G C T G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G