Information for 5-CGATGCACGCACAGCT (Motif 19)

A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C A C T G
p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 17.1bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGATGCACGCACAGCT
--TBGCACGCAA----
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGATGCACGCACAGCT
-----CACGCA-----
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:CGATGCACGCACAGCT
---------CACAGN-
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGATGCACGCACAGCT
----CCAGGAACAG--
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGATGCACGCACAGCT
----GCACGTNC----
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CGATGCACGCACAGCT-
---------AACAGCTG
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CGATGCACGCACAGCT
----GCACGTAY----
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:CGATGCACGCACAGCT----
----------HCAGCTGDTN
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:CGATGCACGCACAGCT----
----------ACAGCTGTTV
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.52
Offset:8
Orientation:forward strand
Alignment:CGATGCACGCACAGCT--
--------NAACAGCTGG
 A G T C A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G