Information for 1-GGGGAGTCCACAGGCC (Motif 9)

A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C A G T C A C G T A C T G A C G T A C T G A C T G C G T A A G T C C G A T A G T C A G T C A T G C A G T C
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 22.4bp
Average Position of motif in Background33.5 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGTCCACAGGCC
GGGGGAATCCCC-----
 A C G T A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGTCCACAGGCC
AGGGGAATCCCCT----
 A C G T A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAGTCCACAGGCC
AGGGGAATCCCCT----
 A C G T A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGGGAGTCCACAGGCC
NTNTGGGGGGTCNNNA----
 A C G T A C G T A C G T A C G T A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGGGAGTCCACAGGCC
NTNNNAGGAGTCTCNTN---
 A C G T A C G T A C G T A C G T A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGTCCACAGGCC
TGGGGA-----------
 A C G T A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGGGAGTCCACAGGCC-
---NTGCCCANNGGTNA
 A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGGGAGTCCACAGGCC
--SSAATCCACANN--
 A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGGGAGTCCACAGGCC
--TGAGTCAGCA----
 A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGGGAGTCCACAGGCC
-TCCAATCCACA----
 A C T G A T C G A C T G A C T G C G T A A C T G A C G T A G T C G T A C C G T A A G T C C G T A C T A G A C T G A G T C A G T C
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T