Information for 3-AAAHCTCATTTGT (Motif 3)

C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T
Reverse Opposite:
C G T A G A T C C G T A C G T A C G T A A C G T A C T G C G T A A C T G C A T G A G C T A C G T A C G T
p-value:1e-11
log p-value:-2.631e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.1 +/- 25.0bp
Average Position of motif in Background58.1 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAAHCTCATTTGT-
----ACCATATGTT
 C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAHCTCATTTGT---
GCAACCTCATTATNNNN
 A C G T C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAAHCTCATTTGT
-----CCATATGT
 C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAHCTCATTTGT---
NNNACCTCATTATCNTN
 A C G T C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

JDP2/MA0655.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAHCTCATTTGT
ATGACTCAT----
 C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T
T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAHCTCATTTGT
--AGCTCATTAT-
 C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T
A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAAHCTCATTTGT---
CAAAGCTAATTAGNTTN
 A C G T C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T A C G T A C G T A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAAHCTCATTTGT------
---ANTCCTTTGTCTNNNN
 C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAHCTCATTTGT
CATGACTCATC---
 A C G T C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C A C G T A C G T A C G T

PH0027.1_Emx2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAHCTCATTTGT----
ACCACTAATTAGTGGAC
 C G T A G T C A T C G A G A T C A G T C A C G T A G T C C G T A A C G T C G A T A C G T C T A G A C G T A C G T A C G T A C G T A C G T
G C T A T A G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G T A C G G C T A A G T C