Information for 3-GSCSKGMTTCTCT (Motif 4)

A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G G T C A A C T G C G T A C T G A A C T G A T G C G T A C A T C G A C T G T A C G A G T C
p-value:1e-12
log p-value:-2.875e+01
Information Content per bp:1.863
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets66.9 +/- 20.9bp
Average Position of motif in Background45.3 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GSCSKGMTTCTCT
-----GCTTCC--
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GSCSKGMTTCTCT
-----TCTTATCT
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GSCSKGMTTCTCT-
----NNCTTATCTN
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GSCSKGMTTCTCT-
----NCCTTATCTG
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GSCSKGMTTCTCT--
----TTCTTATCTGT
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GSCSKGMTTCTCT--
-----YCTTATCTBN
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GSCSKGMTTCTCT--
GTCATGCHTGRCTGS
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GSCSKGMTTCTCT---
-----TCTTATCTCCC
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GSCSKGMTTCTCT
GCAGTGATTT---
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GSCSKGMTTCTCT---
AGGGGGATTAGCTGCC
 A C T G A T G C A G T C A T G C A C T G A T C G G T A C A G C T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C