Information for 4-AGGCGATTGCCCGGCA (Motif 16)

C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
Reverse Opposite:
A G C T C T A G A G T C A G T C A C T G A T C G A C T G A G T C G T C A C T G A A G C T A G T C A C T G A G T C A G T C C G A T
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.2 +/- 25.7bp
Average Position of motif in Background39.9 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB1/MA0105.4/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGCGATTGCCCGGCA
AGGGGAATCCCCT---
 C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGCGATTGCCCGGCA
AGGGGATTCCCCT---
 C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCGATTGCCCGGCA
-GGGGATTCCCCC---
 C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGGCGATTGCCCGGCA
--GCGCCTGCGCA---
 C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGGCGATTGCCCGGCA
--GCGCATGCGCAG--
 C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGCGATTGCCCGGCA
NGGGGATTTCCC----
 C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGCGATTGCCCGGCA
--GCGCATGCGCAC--
 C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGGCGATTGCCCGGCA
NAGGTCANTGACCT---
 A C G T C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AGGCGATTGCCCGGCA--
------TTTCCCGCCAAA
 C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:AGGCGATTGCCCGGCA
--GGGATTGCATNN--
 C G T A A C T G A C T G G T A C A C T G C T G A A G C T A C G T A C T G G T A C A T G C A G T C A C T G A C T G A G T C C T G A
A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T